TTRMDb
An amyloid disease database for transthyretin mutants
Sequence
Analysis Tool |
Result |
iMutant 3.0 | Destabilizing |
STRUM | Stabilizing |
iStable | Destabilizing |
Provean | Deleterious |
PredictSNP | Neutral |
PhD-SNP | Neutral |
PolyPhen-2 | Neutral |
SIFT | Neutral |
FATHMM | Damaging |
Structure
Analysis Tool |
Result |
mCSM | Destabilizing |
SDM | Stabilizing |
DUET | Destabilizing |
DynaMut | Destabilizing |
CUPSAT | Destabilizing |
ENCoM | Destabilizing |
FoldX (Protein Stability) | Slightly Reduces |
Aggregation
Analysis Tool |
Result |
TANGO (Aggregation Tendency) | No effect |
WALTZ (Amyloid Propensity) | No effect |
LIMBO (Chaperone Binding Tendency) | No effect |
Reported Articles
- Ueno S, Uemichi T, Takahashi N, Soga F, Yorifuji S, and Tarui S. (1990). Two novel variants of transthyretin
identified in Japanese cases with familial amyloidotic polyneuropathy: Transthyretin (Glu42 to Gly) and
transthyretin (Ser50 to Arg) Biochem Biophys Res Commun. 169:1117.
- Uemichi T, Ueno S, Takahashi N, Soga F, Yorifuji S, and Tarui S. (1991). [DNA tests for mutant genes coding
for transthyretins Gly42, Arg50, and Cys114 in Japanese cases of familial amyloid polyneuropathy].
Rinsho Shinikeigaku. 31:1151-1154.
- Uemichi T, Ueno S, Fujimura H, Umekage T, Yorifuji S, Matsuzawa Y, and Tarui S. (1992). Familial amyloid
polyneuropathy related to transthyretin Gly42 in a Japanese family. Muscle Nerve. 15:1027.
- Skare J, Jones LA, Myles N, Kane K, Milunsky A, Cohen A, and Skinner M. (1994). Two transthyretin
mutations (glu42gly, his90asn) in an Italian family with amyloidosis. Clin Genet. 45(6):281-284.
- Toyooka K, Fujimura H, Ueno S, Yoshikawa H, Kaido M, Nishimura T, Yorifuji S, and Yanagihara T. (1995).
Familial amyloid polyneuropathy associated with transthyretin Gly42 mutation: a quantitative light and
electron microscopic study of the peripheral nervous system. Acta Neuropathol (Berl). 90:516-525.
Studies on Therapeutic Strategy*
- Adams D, Gonzalez-Duarte A, O’Riordan WD, Yang C-C, Ueda M, Kristen AV, et
al. Patisiran, an RNAi Therapeutic, for Hereditary Transthyretin Amyloidosis.
N Engl J Med. 2018;379: 11–21. doi:10.1056/NEJMoa1716153
*includes studies on model organisms and commercially unavailable drugs